【2021 原著論文】
M. Sumikawa, R. Abe-Yoshizumi, T. Uchihashi, H. Kandori*
"Molecular Origin of the Anomalous pH Effect in Blue Proteorhodopsin"
J. Phys. Chem. Lett. 12, 51, 12225–12229 (2021)
10.1021/acs.jpclett.1c03355
V. A. Lorenz-Fonfria*, K. Yagi, S. Ito, H. Kandori
"Retinal Vibrations in Bacteriorhodopsin are Mechanically Harmonic but Electrically Anharmonic: Evidence From Overtone and Combination Bands"
Front. Mol. Biosci.8, 749261 (2021)
10.3389/fmolb.2021.749261
P.-A. Bulzu, V. S. Kavagutti, C. Chiriac, C. D. Vavourakis, K. Inoue, H. Kandori, A.-S. Andrei, R. Ghai*
"Heliorhodopsin evolution is driven by photosensory promiscuity in monoderms"
mSphere 6,6
10.1128/msphere.00661-21
K. Katayama*, K. Suzuki, R. Suno, R. Kise, H. Tsujimoto, S. Iwata, A. Inoue, T. Kobayashi, H. Kandori*
"Vibrational spectroscopy analysis of ligand efficacy in human M2 muscarinic acetylcholine receptor (M2R)"
Commun. Biol. 4, 1321 (2021)
10.1038/s42003-021-02836-1
D. Yamada, J. Yamamoto, E. D. Getzoff, T. Iwata*, H. Kandori*
"Structural changes during the photorepair and binding processes of Xenopus (6–4) photolyase with (6–4) photoproducts in single- and double-stranded DNA"
Biochemistry, 60, 43, 3253–3261
10.1021/acs.biochem.1c00413
C.-F. Chang, H. Kuramochi, M. Singh, R. Abe-Yoshizumi, T. Tsukuda, H. Kandori, T. Tahara*
"A Unified View on Varied Ultrafast Dynamics of the Primary Process in Microbial Rhodopsins"
Angew. Chem. Int. Ed.
10.1002/anie.202111930
T. Shionoya, M. Singh, M. Mizuno, H. Kandori, Y. Mizutani*
"Strongly hydrogen-bonded Schiff base and adjoining polyene twisting in the retinal chromophore of schizorhodopsins"
Biochemistry 60, 41, 3050-3057
10.1021/acs.biochem.1c00529
Y. Nakajima, L. P. -González, L. Barneschi, K. Inoue, M. Olivucci*, H. Kandori*
"Pro219 is an electrostatic color determinant in the light-driven sodium pump KR2"
Commun. Biol. 4, 1185 (2021)
10.1038/s42003-021-02684-z
M. Hamada, T. Iwata*, M. Fuki, H. Kandori, S. Weber*, Y. Kobori*
"Orientations and water dynamics of photoinduced secondary charge-separated states for magnetoreception by cryptochrome"
Commun. Chem. 4, 141 (2021)
10.1038/s42004-021-00573-4
S. Hososhima, H. Kandori, S. P. Tsunoda*
"Ion transport activity and optogenetics capability of light-driven Na+-pump KR2"
PLoS ONE 16(9):e0256728 (2021)
10.1371/journal.pone.0256728
T. Matsubara, T. Yanagida, N. Kawaguchi, T. Nakano, J. Yoshimoto, M. Sezaki, H. Takizawa, S. P. Tsunoda, S. Horigane, S. Ueda, S. Takemoto-Kimura, H. Kandori, A. Yamanaka, T. Yamashita*
"Remote control of neural function by X-ray-induced scintillation"
Nat. Commun. 12, 4478 (2021)
10.1038/s41467-021-24717-1
S. Tomida, S. Kitagawa, H. Kandori*, Y. Furutani*
"Inverse Hydrogen-Bonding Change Between the Protonated Retinal Schiff Base and Water Molecules upon Photoisomerization in Heliorhodopsin 48C12"
J. Phys. Chem. B 125, 30, 8331–8341 (2021)
10.1021/acs.jpcb.1c01907
T. Urui, M. Mizuno, A. Otomo, H. Kandori, Y. Mizutani*
"Resonance Raman Determination of Chromophore Structures of Heliorhodopsin Photointermediates"
J. Phys. Chem. B 125, 26, 7155–7162 (2021)
10.1021/acs.jpcb.1c04010
T. Sugimoto, K. Katayama, H. Kandori*
"Role of Thr82 for the unique photochemistry of TAT rhodopsin"
Biophys. Physicobiol. 18, 108–115 (2021)
10.2142/biophysico.bppb-v18.012
K. Suzuki, K. Katayama, Y. Sumii, T. Nakagita, R. Suno, H. Tsujimoto, S. Iwata, T. Kobayashi, N. Shibata, H. Kandori*
"Vibrational analysis of acetylcholine binding to the M2 receptor"
RSC Adv., 11, 12559-12567 (2021)
10.1039/d1ra01030a
A. Higuchi, W. Shihoya*, M. Konno, T. Ikuta, H. Kandori, K. Inoue*, O. Nureki
"Crystal structure of schizorhodopsin reveals mechanism of inward proton pumping"
Proc. Natl. Acad. Sci. USA 118 (14) e2016328118
10.1073/pnas.2016328118
K. Oda, T. Nomura, T. Nakane, K. Yamashita, K. Inoue, S. Ito, J. Vierock, K. Hirata, Andrés D Maturana, K. Katayama, T. Ikuta, I. Ishigami, T. Izume, R. Umeda, R. Eguma, S. Oishi, G. Kasuya, T. Kato, T. Kusakizako, W. Shihoya, H. Shimada, T. Takatsuji, M. Takemoto, R. Taniguchi, A. Tomita, R. Nakamura, M. Fukuda, H. Miyauchi, Y. Lee, E. Nango, R. Tanaka, T. Tanaka, M. Sugahara, T. Kimura, T. Shimamura, T. Fujiwara, Y. Yamanaka, S. Owada, Y. Joti, K. Tono, R. Ishitani, S. Hayashi, H. Kandori, P. Hegemann, S. Iwata, M. Kubo*, T. Nishizawa* , O. Nureki*
"Time-resolved serial femtosecond crystallography reveals early structural changes in channelrhodopsin"
Elife, 10, e62389
10.7554/eLife.62389
K. Inoue*, M. Karasuyama, R. Nakamura, M. Konno, D. Yamada, K. Mannen, T. Nagata, Y. Inatsu, H. Yawo, K. Yura, O. Béjà, H. Kandori, I. Takeuchi*
"Exploration of natural red-shifted rhodopsins using a machine learning-based Bayesian experimental design"
Commun. Biol. 4, 362 (2021)
10.1038/s42003-021-01878-9
C. Kataoka, T. Sugimoto, S. Shigemura, K. Katayama, S. P. Tsunoda, K. Inoue, O. Béjà, H. Kandori*
"TAT rhodopsin is a UV-dependent environmental pH sensor"
Biochemistry 60, 12, 899−907 (2021)
10.1021/acs.biochem.0c00951
R. Tashiro, K. Sushmita, S. Hososhima, S. Sharma, S. Kateriya, H. Kandori, S. P. Tsunoda*
"Specific residues in the cytoplasmic domain modulate photocurrent kinetics of channelrhodopsin from Klebsormidium nitens"
Commun. Biol. 4, 235 (2021)
10.1038/s42003-021-01755-5
S. Hanai, K. Katayama, H. Imai, H. Kandori*
"Light-induced difference FTIR spectroscopy of primate blue-sensitive visual pigment at 163 K"
Biophys. Physicobiol. 18, 40-49 (2021)
10.2142/biophysico.bppb-v18.005
H. Kandori*
"History and Perspectives of Ion-Transporting Rhodopsins"
Adv. Exp. Med. Biol. 1293, 3-19
10.1007/978-981-15-8763-4_1
S. P. Tsunoda*, M. Sugiura, H. Kandori
"Molecular Properties and Optogenetic Applications of Enzymerhodopsins"
Adv. Exp. Med. Biol. 1293, 153-165
10.1007/978-981-15-8763-4_9
M. Konno*, Y. Yamauchi, K. Inoue, H. Kandori*
"Expression analysis of microbial rhodopsin-like genes in Guillardia theta"
PLoS ONE 15(12):e0243387
10.1371/journal.pone.0243387
【2021 総説・図書】
M. Konno, K. Inoue*, H. Kandori*
"Ion Transport Activity Assay for Microbial Rhodopsin Expressed in Escherichia coli Cells"
Bio Protoc. 11(15):e4115 (2021)
10.21769/BioProtoc.4115
A. Rozenberg, K. Inoue, H. Kandori, O. Béjà
"Microbial Rhodopsins: The Last Two Decades"
Annu. Rev. Microbiol, 75, 427-447
10.1146/annurev-micro-031721-020452
神取秀樹
"私を驚かせてください"
内藤財団時報 巻頭言 若い研究者のために
杉浦雅大
"若手の会だより ～これまでを振り返って～"
J-STAGEトップ/生物物理/2021 年 61 巻 1 号 p. 055-056
10.2142/biophys.61.055